Hardware, Software, Wetware, Co-Design Research

High level application specifications are automatically converted to hardware to support the functional, structural, and performance requirements of the described application. In CIDAR, this hardware takes the form of custom microfluidic devices that can control, manipulate, and process data for engineered biological systems.   

HARDWARE

Hardware

Software

Software tools and algorithms provide mechanisms to map application functionality to biological elements (e.g.  compile to DNA). In addition, software can be automatically generated to control microfluidics to meet specific function and performance requirements.

SOFT
WARE

Wetware

Engineered biological building blocks with well characterized performance parameters are the primitives on which CIDAR research designs systems. These elements are explicitly designed to be amendable to high throughput assembly protocols and are stored both virtually and physically using on-line "parts registries".

WET
WARE

Design Automation

Software tools make synthetic biology more effective by integrating concepts from electronic design automation into the specification, design, and assembly of complex biological systems.

Interdisciplinary Approach

CIDAR is composed of a diverse team of undergraduates, graduate students, post-docs, and research staff from a range of programming, engineering and scientific backgrounds.

Mixed Purpose Workspaces

With both Computational and Wetlab facilities, CIDAR has workspaces for software development and biological engineering research across multiple  departments at Boston University.

Latest News

Science Lab

David publishes a review article in Lab on a Chip

Working with CIDAR Lab alum Ali Lashkaripour from the Fordyce lab at Stanford University, David co-authored a review paper surveying the applications of machine learning for microfluidic design and control. They also highlighted the challenges and outlook for machine learning-enabled microfluidics. Read the article here: https://pubs.rsc.org/en/content/articlehtml/2022/lc/d2lc00254j